Basic Information
Locus ID:
CQ.Regalona.r1.8AG0007260
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 10707843 | 10714934 | + | CQ.Regalona.r1.8AG0007260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.55 | 71,078.94 Da | 39.36 | 94.26 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 68 | 4.6E-7 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 297 | 584 | 8.4E-41 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 193 | 1.26E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 266 | 586 | 1.73E-73 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 265 | 370 | 7.4E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 210 | 5.3E-54 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 395 | 594 | 3.4E-60 | - |
| SMART | SM00369 | LRR_typ_2 | 166 | 189 | 27.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 295 | 594 | 5.9E-25 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 94 | 117 | 390.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 118 | 142 | 1.9 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 295 | 594 | 35.650906 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 120 | 142 | 7.095899 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 436 | 448 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 301 | 323 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45780.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021724092.1 | probable LRR receptor-like serine/threonine-protein kinase At5g45780 [Chenopodium quinoa] | 0 |
| C0LGU5 | Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana OX=3702 GN=At5g45780 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803ME10 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology