Basic Information
Locus ID:
CQ.Regalona.r1.8AG0003520
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 4292379 | 4295013 | - | CQ.Regalona.r1.8AG0003520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.55 | 42,185.21 Da | 32.98 | 78.80 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00954 | S-locus glycoprotein domain | 51 | 125 | 1.2E-8 | IPR000858 |
| Pfam | PF00069 | Protein kinase domain | 304 | 365 | 1.3E-10 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 233 | 366 | 1.09E-34 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 309 | 375 | 5.6E-16 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 216 | 308 | 9.9E-29 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 75 | 376 | 13.743208 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 253 | 275 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11330.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_021846791.1 | uncharacterized protein LOC110786543 [Spinacia oleracea] | 0 |
| Q9SXB8 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana OX=3702 GN=At1g11330 PE=1 SV=3 | 0 | |
| TrEMBL | A0A2N9IAS3 | non-specific serine/threonine protein kinase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50908 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah017810 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.8AG0003520 |