Basic Information
Locus ID:
CQ.Regalona.r1.8AG0003140
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 3878150 | 3881157 | - | CQ.Regalona.r1.8AG0003140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.23 | 66,690.07 Da | 38.74 | 85.90 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 42 | 132 | 4.0E-14 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 454 | 556 | 1.4E-6 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 366 | 450 | 3.9E-14 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 158 | 255 | 1.1E-9 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 350 | 573 | 7.72E-44 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 328 | 439 | 1.6E-37 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 149 | 259 | 3.1E-19 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 450 | 561 | 5.5E-13 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 30 | 135 | 9.0E-19 | IPR038408 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 364 | 605 | 12.881035 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 32 | 135 | 16.44359 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 147 | 259 | 16.44359 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 370 | 392 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021726272.1 | putative receptor-like protein kinase At4g00960 [Chenopodium quinoa] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803LKZ1 | Cysteine-rich receptor-like protein kinase 10 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 3 | Sgl41623, Sgl41658, Sgl46419 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.8AG0003140 |