Basic Information
Locus ID:
CQ.Regalona.r1.8AG0002610
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 3278201 | 3281888 | + | CQ.Regalona.r1.8AG0002610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.30 | 45,143.21 Da | 37.94 | 93.57 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 237 | 344 | 2.6E-9 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 134 | 219 | 2.5E-16 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 116 | 365 | 1.68E-47 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 206 | 350 | 4.4E-25 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 116 | 205 | 4.8E-34 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 27 | 115 | 1.0E-5 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 25 | 131 | 9.609254 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 131 | 398 | 12.683158 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 137 | 159 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23140.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 6. Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 0 |
| RefSeq | XP_021719478.1 | cysteine-rich receptor-like protein kinase 8 [Chenopodium quinoa] | 0 |
| Q9C5S9 | Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana OX=3702 GN=CRK6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803L1E5 | Cysteine-rich receptor-like protein kinase 25 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 4 | Sgl46172, Sgl46196, Sgl50868, Sgl50874 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.8AG0002610 |