Basic Information
Locus ID:
CQ.Regalona.r1.8AG0002500
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 3122810 | 3130294 | + | CQ.Regalona.r1.8AG0002500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.24 | 102,161.60 Da | 39.48 | 78.71 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 601 | 865 | 6.89943E-95 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 600 | 863 | 1.8E-47 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 35 | 133 | 1.1E-20 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 156 | 244 | 1.9E-9 | IPR002902 |
| Pfam | PF00314 | Thaumatin family | 276 | 490 | 4.1E-44 | IPR001938 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 578 | 866 | 5.13E-79 | IPR011009 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 270 | 491 | 2.75E-45 | IPR037176 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 671 | 886 | 8.0E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 558 | 670 | 1.1E-35 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 26 | 135 | 3.3E-25 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 146 | 247 | 5.5E-19 | IPR038408 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 270 | 490 | 2.0E-50 | IPR037176 |
| SMART | SM00220 | serkin_6 | 595 | 844 | 1.9E-30 | IPR000719 |
| SMART | SM00205 | tha2 | 272 | 490 | 1.2E-30 | IPR001938 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 142 | 247 | 15.121983 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 29 | 136 | 19.982962 | IPR002902 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 269 | 490 | 24.125284 | IPR001938 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 595 | 876 | 37.149113 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 601 | 623 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 716 | 728 | - | IPR008271 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 271 | 283 | 3.8E-8 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 319 | 330 | 3.8E-8 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 480 | 489 | 3.8E-8 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 371 | 387 | 3.8E-8 | IPR001938 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 895 | 929 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021719619.1 | cysteine-rich receptor-like protein kinase 25 isoform X1 [Chenopodium quinoa] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803M242 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000047138 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.8AG0002500 |