Basic Information
Locus ID:
CQ.Regalona.r1.8AG0002460
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 3019875 | 3030976 | - | CQ.Regalona.r1.8AG0002460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.53 | 66,461.91 Da | 34.48 | 79.34 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 321 | 525 | 6.7E-32 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 41 | 136 | 4.5E-19 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 162 | 260 | 2.8E-7 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 280 | 559 | 3.64E-65 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 333 | 548 | 5.5E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 264 | 327 | 5.0E-13 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 147 | 263 | 7.3E-17 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 29 | 139 | 6.6E-25 | IPR038408 |
| SMART | SM00220 | serkin_6 | 294 | 506 | 3.4E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 194 | 538 | 25.022139 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 30 | 139 | 19.077751 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 145 | 263 | 14.062887 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 378 | 390 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 300 | 322 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 559 | 591 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021719623.1 | cysteine-rich receptor-like protein kinase 5 isoform X1 [Chenopodium quinoa] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803MVD4 | Cysteine-rich receptor-like protein kinase 25 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 6 | gene:ENSEOMG00000011967, gene:ENSEOMG00000030044 ... |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.8AG0002460 |