Basic Information
Locus ID:
CQ.Regalona.r1.8AG0001250
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 1520766 | 1528077 | - | CQ.Regalona.r1.8AG0001250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.00 | 77,554.91 Da | 43.14 | 86.98 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 413 | 684 | 1.77428E-86 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 409 | 681 | 4.5E-45 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 167 | 188 | 0.62 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 96 | 153 | 3.4E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 69 | 3.8E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 236 | 8.75E-39 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 389 | 681 | 9.84E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 486 | 705 | 4.7E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 369 | 484 | 5.1E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 249 | 6.9E-49 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 407 | 684 | 37.898212 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 326 | 347 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 282 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 293 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 0 |
| RefSeq | XP_021719745.1 | protein STRUBBELIG-RECEPTOR FAMILY 8-like isoform X1 [Chenopodium quinoa] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RZD9 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_012130 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology