Basic Information
Locus ID:
CQ.Regalona.r1.8AG0000020
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 12543 | 20926 | - | CQ.Regalona.r1.8AG0000020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.22 | 30,071.28 Da | 53.37 | 95.94 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1 | 193 | 1.5E-18 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 207 | 7.76E-38 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 7 | 206 | 2.1E-42 | - |
| SMART | SM00219 | tyrkin_6 | 1 | 197 | 0.0048 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 212 | 18.690107 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 52 | 64 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27290.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_021735345.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X2 [Chenopodium quinoa] | 0 |
| O81832 | G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana OX=3702 GN=At4g27290 PE=3 SV=4 | 0 | |
| TrEMBL | A0A803LRQ9 | Receptor-like serine/threonine-protein kinase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg58674 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl61814 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.8AG0000020 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC120112420 |
| Asteraceae | Flaveria trinervia | 1 | Ftri15G15711 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G1507 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-58424 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000003l.132 |
| Salicaceae | Populus euphratica | 1 | populus_peu37425 |