Basic Information
Locus ID:
CQ.Regalona.r1.7BG0025980
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7B | 75470324 | 75482851 | + | CQ.Regalona.r1.7BG0025980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.87 | 105,417.61 Da | 37.37 | 95.73 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 621 | 888 | 1.06698E-92 | - |
| Pfam | PF00069 | Protein kinase domain | 616 | 883 | 2.4E-47 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 64 | 2.7E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 147 | 206 | 4.6E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 34 | 385 | 6.12E-54 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 600 | 918 | 1.5E-79 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 289 | 380 | 6.0E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 288 | 3.5E-66 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 692 | 904 | 2.6E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 585 | 691 | 7.4E-34 | - |
| SMART | SM00220 | serkin_6 | 615 | 892 | 7.6E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 615 | 889 | 38.929996 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 736 | 748 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 621 | 644 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021723320.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Chenopodium quinoa] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803MI52 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology