Basic Information
Locus ID:
CQ.Regalona.r1.7BG0024740
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Short Name:
CERK1
Description:
chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7B | 73549619 | 73555418 | - | CQ.Regalona.r1.7BG0024740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.34 | 66,256.43 Da | 27.37 | 89.60 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 304 | 564 | 6.8539E-90 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 303 | 566 | 9.7E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 277 | 567 | 2.56E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 369 | 584 | 6.7E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 277 | 368 | 3.8E-26 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 36 | 98 | 9.6E-6 | IPR036779 |
| SMART | SM00257 | LysM_2 | 105 | 151 | 6.1 | IPR018392 |
| SMART | SM00257 | LysM_2 | 170 | 219 | 22.0 | IPR018392 |
| SMART | SM00220 | serkin_6 | 298 | 569 | 1.7E-42 | IPR000719 |
| SMART | SM00257 | LysM_2 | 38 | 89 | 0.18 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 298 | 570 | 38.520111 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 304 | 326 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 413 | 425 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_021850694.1 | lysM domain receptor-like kinase 3 [Spinacia oleracea] | 0 |
| Q6UD73 | LysM domain receptor-like kinase 3 OS=Medicago truncatula OX=3880 GN=LYK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MB98 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology