Basic Information
Locus ID:
CQ.Regalona.r1.7BG0021980
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Myb/SANT-like DNA-binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7B | 66383432 | 66385283 | + | CQ.Regalona.r1.7BG0021980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 46,554.09 Da | 48.54 | 49.83 | -1.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13837 | Myb/SANT-like DNA-binding domain | 144 | 276 | 1.6E-22 | IPR044822 |
| Gene3D | G3DSA:1.10.10.60 | - | 147 | 227 | 5.4E-13 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 377 | 394 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 341 | 365 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 300 | 320 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 320 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 111 | 137 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 117 | 131 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 338 | 419 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10040.1 | sequence-specific DNA binding transcription factors. | 0 |
| RefSeq | XP_021743162.1 | uncharacterized protein LOC110709255 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A7C9DLG0 | Myb_DNA-bind_4 domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology