Basic Information
Locus ID:
CQ.Regalona.r1.7BG0014820
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Short Name:
RPL18
Description:
60s ribosomal protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7B | 16654201 | 16656753 | - | CQ.Regalona.r1.7BG0014820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.87 | 20,844.25 Da | 36.20 | 83.96 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17135 | Ribosomal protein 60S L18 and 50S L18e | 2 | 186 | 1.2E-94 | IPR021131 |
| SUPERFAMILY | SSF52080 | Ribosomal proteins L15p and L18e | 20 | 139 | 3.4E-27 | IPR036227 |
| Gene3D | G3DSA:3.100.10.10 | - | 1 | 187 | 3.0E-100 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 153 | 187 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 173 | 187 | - | - |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G27850.1 | Ribosomal protein L18e/L15 superfamily protein. | 0 |
| RefSeq | XP_021763208.1 | 60S ribosomal protein L18-3-like [Chenopodium quinoa] | 0 |
| Q940B0 | Large ribosomal subunit protein eL18x OS=Arabidopsis thaliana OX=3702 GN=RPL18C PE=2 SV=1 | 0 | |
| TrEMBL | A0A803M9I3 | Ribosomal_L18e/L15P domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology