HalophFGD

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Basic Information
Locus ID: CQ.Regalona.r1.7BG0009460
Species & Taxonomic ID: Chenopodium quinoa & 63459
Genome Assembly: GCA_040571445.1
Description: f-box protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr7B 9504354 9505567 + CQ.Regalona.r1.7BG0009460
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.56 44,908.61 Da 37.45 83.28 -0.29
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 14 77 9.81E-9 IPR036047
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 118 322 1.0E-13 IPR017451
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G10340.1 F-box family protein. 0
RefSeq XP_021736520.1 F-box protein At3g07870-like [Chenopodium quinoa] 0
Swiss-Prot Q9LX89 F-box protein At5g10340 OS=Arabidopsis thaliana OX=3702 GN=At5g10340 PE=2 SV=1 0
TrEMBL A0A803LE82 F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 14 Ah010513, Ah010514, Ah010515, Ah010517, Ah010518, Ah010519 ...
Ah010521, Ah010523, Ah010524, Ah010525, Ah010526, Ah010529, Ah010530, Ah010533
Amaranthaceae Salicornia bigelovii 1 Sbi_jg11619
Amaranthaceae Chenopodium album 3 gene:ENSEOMG00000014872, gene:ENSEOMG00000039400 ...
gene:ENSEOMG00000052018
Amaranthaceae Chenopodium quinoa 12 CQ.Regalona.r1.7BG0009460, CQ.Regalona.r1.7BG0009480 ...
CQ.Regalona.r1.7BG0009490, CQ.Regalona.r1.7BG0009500, CQ.Regalona.r1.7BG0009510, CQ.Regalona.r1.7BG0009520, CQ.Regalona.r1.9AG0015070, CQ.Regalona.r1.9AG0015080, CQ.Regalona.r1.9AG0015090, CQ.Regalona.r1.9AG0015100, CQ.Regalona.r1.9AG0015110, CQ.Regalona.r1.9AG0015120
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.