HalophFGD

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Basic Information
Locus ID: CQ.Regalona.r1.7BG0009430
Species & Taxonomic ID: Chenopodium quinoa & 63459
Genome Assembly: GCA_040571445.1
Description: F-box kelch-repeat protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr7B 9467353 9468049 - CQ.Regalona.r1.7BG0009430
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.66 21,942.21 Da 43.15 92.38 0.06
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 15 54 1.9E-4 IPR001810
SUPERFAMILY SSF81383 F-box domain 14 85 2.88E-11 IPR036047
Gene3D G3DSA:1.20.1280.50 - 13 52 3.1E-5 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G10340.1 F-box family protein. 0
RefSeq XP_021736586.1 putative F-box/kelch-repeat protein At1g12870 [Chenopodium quinoa] 0
Swiss-Prot Q9LX89 F-box protein At5g10340 OS=Arabidopsis thaliana OX=3702 GN=At5g10340 PE=2 SV=1 0
TrEMBL A0A803LMX0 F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 4 Ah006920, Ah010347, Ah010827, Ah037108
Amaranthaceae Salicornia bigelovii 1 Sbi_jg46576
Amaranthaceae Suaeda glauca 3 Sgl70951, Sgl74470, Sgl74565
Amaranthaceae Chenopodium album 2 gene:ENSEOMG00000019836, gene:ENSEOMG00000020147
Amaranthaceae Chenopodium quinoa 4 CQ.Regalona.r1.3AG0025030, CQ.Regalona.r1.4BG0008370 ...
CQ.Regalona.r1.7BG0009430, CQ.Regalona.r1.7BG0009440
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.