HalophFGD

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Basic Information
Locus ID: CQ.Regalona.r1.7BG0009060
Species & Taxonomic ID: Chenopodium quinoa & 63459
Genome Assembly: GCA_040571445.1
Description: F-box LRR-repeat protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr7B 9086823 9088226 - CQ.Regalona.r1.7BG0009060
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.90 51,987.16 Da 39.86 114.35 0.15
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF52047 RNI-like 83 432 1.73E-26 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 213 341 2.5E-10 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 53 137 8.2E-10 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 138 212 2.2E-6 IPR032675
Gene3D G3DSA:1.20.1280.50 - 1 40 1.1E-5 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 342 465 2.2E-15 IPR032675
SMART SM00367 LRR_CC_2 431 456 80.0 IPR006553
SMART SM00367 LRR_CC_2 96 121 1.3E-4 IPR006553
SMART SM00367 LRR_CC_2 147 173 62.0 IPR006553
SMART SM00367 LRR_CC_2 260 285 43.0 IPR006553
SMART SM00367 LRR_CC_2 379 406 12.0 IPR006553
SMART SM00367 LRR_CC_2 234 259 20.0 IPR006553
ProSiteProfiles PS50181 F-box domain profile. 1 45 9.550458 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K10268 (F-box and leucine-rich repeat protein 2/20)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G80570.1 RNI-like superfamily protein. 0
RefSeq XP_021738454.1 F-box/LRR-repeat protein 14-like [Chenopodium quinoa] 0
Swiss-Prot Q3EC97 F-box/LRR-repeat protein 14 OS=Arabidopsis thaliana OX=3702 GN=FBL14 PE=2 SV=1 0
TrEMBL A0A803LNS4 F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 1 jg18288
Aizoaceae Mesembryanthemum crystallinum 1 gene_26237
Amaranthaceae Atriplex hortensis 1 Ah010404
Amaranthaceae Beta vulgaris 1 BVRB_9g218950
Amaranthaceae Salicornia bigelovii 2 Sbi_jg11650, Sbi_jg46748
Amaranthaceae Salicornia europaea 1 Seu_jg20901
Amaranthaceae Suaeda aralocaspica 1 GOSA_00005117
Amaranthaceae Suaeda glauca 3 Sgl56015, Sgl60659, Sgl61208
Amaranthaceae Chenopodium album 3 gene:ENSEOMG00000017343, gene:ENSEOMG00000036806 ...
gene:ENSEOMG00000051267
Amaranthaceae Chenopodium quinoa 2 CQ.Regalona.r1.7BG0009060, CQ.Regalona.r1.9AG0015420
Anacardiaceae Pistacia vera 1 pistato.v30129580
Arecaceae Cocos nucifera 1 COCNU_11G000770
Arecaceae Phoenix dactylifera 1 gene-LOC103723850
Asparagaceae Asparagus officinalis 1 AsparagusV1_03.3116.V1.1
Asteraceae Flaveria trinervia 2 Ftri16G06360, Ftri2G33928
Brassicaceae Arabidopsis thaliana 1 AT1G80570.2
Brassicaceae Eutrema salsugineum 1 Thhalv10018507m.g.v1.0
Brassicaceae Schrenkiella parvula 1 Sp5g35200.v2.2
Brassicaceae Brassica nigra 2 BniB05g048970.2N, BniB05g075600.2N
Casuarinaceae Casuarina equisetifolia 1 Ceq02G0370
Casuarinaceae Casuarina glauca 1 Cgl02G0391
Cymodoceaceae Cymodocea nodosa 1 gene.Cymno03g09580
Dunaliellaceae Dunaliella salina 1 Dusal.0592s00004.v1.0
Hydrocharitaceae Thalassia testudinum 1 gene.Thate05g06520
Nitrariaceae Nitraria sibirica 1 evm.TU.LG01.788
Plantaginaceae Plantago ovata 1 Pov_00034528
Plumbaginaceae Limonium bicolor 2 Lb0G37349, Lb0G37350
Poaceae Echinochloa crus-galli 4 BH05.3639, BH06.1580, BH06.1747, CH06.1734
Poaceae Eleusine coracana subsp. coracana 10 gene-QOZ80_2AG0149230, gene-QOZ80_2AG0149240 ...
gene-QOZ80_2AG0149250, gene-QOZ80_2BG0204930, gene-QOZ80_2BG0204950, gene-QOZ80_6AG0531150, gene-QOZ80_6AG0531160, gene-QOZ80_6BG0484930, gene-QOZ80_6BG0484940, gene-QOZ80_6BG0484950
Poaceae Hordeum vulgare 8 HORVU.MOREX.r3.1HG0000530.1.CDS1 ...
HORVU.MOREX.r3.1HG0011110.1.CDS1, HORVU.MOREX.r3.2HG0131810.1.CDS1, HORVU.MOREX.r3.3HG0233730.1, HORVU.MOREX.r3.5HG0447300.1.CDS1, HORVU.MOREX.r3.6HG0554650.1, HORVU.MOREX.r3.6HG0625230.1.CDS1, HORVU.MOREX.r3.6HG0625260.1.CDS1
Poaceae Lolium multiflorum 28 gene-QYE76_002132, gene-QYE76_002133, gene-QYE76_002134 ...
gene-QYE76_002136, gene-QYE76_002149, gene-QYE76_002600, gene-QYE76_004682, gene-QYE76_004683, gene-QYE76_004684, gene-QYE76_004685, gene-QYE76_004688, gene-QYE76_004689, gene-QYE76_004690, gene-QYE76_004691, gene-QYE76_004692, gene-QYE76_004694, gene-QYE76_006520, gene-QYE76_016389, gene-QYE76_016392, gene-QYE76_016394, gene-QYE76_016396, gene-QYE76_018997, gene-QYE76_019002, gene-QYE76_019003, gene-QYE76_019004, gene-QYE76_026223, gene-QYE76_026225, gene-QYE76_026232
Poaceae Oryza coarctata 4 Oco03G024410, Oco04G024890, Oco23G007550, Oco24G007120
Poaceae Oryza sativa 11 LOC_Os02g55540.2, LOC_Os02g55550.1, LOC_Os04g30180.1 ...
LOC_Os04g30200.1, LOC_Os04g30210.1, LOC_Os04g30230.1, LOC_Os04g30320.1, LOC_Os12g33210.1, LOC_Os12g33220.1, LOC_Os12g33230.1, LOC_Os12g34220.1
Poaceae Paspalum vaginatum 4 gene-BS78_04G052400, gene-BS78_04G307800 ...
gene-BS78_09G150200, gene-BS78_10G137200
Poaceae Puccinellia tenuiflora 7 Pt_Chr0206238, Pt_Chr0702509, Pt_Chr0702511, Pt_Chr0702512 ...
Pt_Chr0702513, Pt_Chr0703683, Pt_Chr0703684
Poaceae Sporobolus alterniflorus 5 Chr09G017500, Chr0G009290, Chr13G001670, Chr16G007170 ...
Chr16G007180
Poaceae Thinopyrum elongatum 22 Tel1E01G012900, Tel1E01G013200, Tel1E01G013600 ...
Tel1E01G013900, Tel1E01G014000, Tel1E01G014100, Tel1E01G019000, Tel1E01G019100, Tel3E01G162200, Tel5E01G189700, Tel5E01G190100, Tel5E01G787200, Tel6E01G220900, Tel6E01G221000, Tel6E01G221200, Tel6E01G570600, Tel6E01G646500, Tel6E01G646600, Tel6E01G646700, Tel6E01G649000, Tel6E01G649200, Tel7E01G736400
Poaceae Triticum dicoccoides 35 gene_TRIDC1AG000530, gene_TRIDC1AG000640 ...
gene_TRIDC1AG006880, gene_TRIDC1BG000990, gene_TRIDC1BG001020, gene_TRIDC1BG001390, gene_TRIDC1BG007920, gene_TRIDC1BG007930, gene_TRIDC1BG011480, gene_TRIDC3AG011050, gene_TRIDC3BG014920, gene_TRIDC5AG014350, gene_TRIDC5AG015440, gene_TRIDC5BG009180, gene_TRIDC5BG017420, gene_TRIDC5BG067850, gene_TRIDC6AG012470, gene_TRIDC6AG012480, gene_TRIDC6AG048330, gene_TRIDC6AG054270, gene_TRIDC6AG054290, gene_TRIDC6AG054300, gene_TRIDC6AG054370, gene_TRIDC6AG054380, gene_TRIDC6AG059990, gene_TRIDC6BG017650, gene_TRIDC6BG017660, gene_TRIDC6BG056480, gene_TRIDC6BG063470, gene_TRIDC6BG063480, gene_TRIDC6BG063590, gene_TRIDC6BG063610, gene_TRIDC7AG060800, gene_TRIDC7BG053840, gene_TRIDC7BG073000
Poaceae Triticum aestivum 63 TraesCS1A02G004900.1, TraesCS1A02G005300.1 ...
TraesCS1A02G006400.1.cds1, TraesCS1A02G051100.1.cds1, TraesCS1B02G006400.1.cds1, TraesCS1B02G007200.1, TraesCS1B02G007300.1, TraesCS1B02G008600.1, TraesCS1B02G008900.1.cds1, TraesCS1B02G009300.1, TraesCS1B02G010300.1.cds1, TraesCS1B02G061600.1.cds1, TraesCS1B02G061700.1.cds1, TraesCS1B02G085600.1.cds1, TraesCS1D02G068100.1.cds1, TraesCS3A02G092200.1.cds1, TraesCS3B02G107300.1.cds1, TraesCS3D02G092100.1.cds1, TraesCS3D02G092300.1.cds1, TraesCS3D02G452200.1, TraesCS5A02G099900.1.cds1, TraesCS5A02G100200.1.cds1, TraesCS5B02G055100.1.cds1, TraesCS5B02G105300.1.cds1, TraesCS5B02G444900.1.cds1, TraesCS5D02G060800.1.cds1, TraesCS5D02G112400.1.cds1, TraesCS5D02G112700.1.cds1, TraesCS5D02G510400.1.cds1, TraesCS6A02G096700.1.cds1, TraesCS6A02G096800.1.cds1, TraesCS6A02G096900.1.cds1, TraesCS6A02G322100.1.cds1, TraesCS6A02G362800.1.cds1, TraesCS6A02G363000.2.cds1, TraesCS6A02G363600.1.cds1, TraesCS6A02G363700.1.cds1, TraesCS6A02G363800.1.cds1, TraesCS6A02G409900.1.cds1, TraesCS6B02G125100.1.cds1, TraesCS6B02G125200.1.cds1, TraesCS6B02G125400.1.cds1, TraesCS6B02G396400.1, TraesCS6B02G396500.1.cds1, TraesCS6B02G396600.1.cds1, TraesCS6B02G398400.1.cds1, TraesCS6D02G085500.1, TraesCS6D02G085600.1.cds1, TraesCS6D02G085700.1.cds1, TraesCS6D02G085800.1.cds1, TraesCS6D02G085900.1.cds1, TraesCS6D02G086000.1, TraesCS6D02G087800.1.cds1, TraesCS6D02G301900.1.cds1, TraesCS6D02G346000.1.cds1, TraesCS6D02G346100.1.cds1, TraesCS6D02G346200.1.cds1, TraesCS6D02G347100.1.cds1, TraesCS6D02G347200.1.cds1, TraesCS6D02G347300.1.cds1, TraesCS7A02G437300.1.cds1, TraesCS7B02G336300.1.cds1, TraesCS7D02G427200.1.cds1
Poaceae Zea mays 1 Zm00001eb258000_P001
Poaceae Zoysia japonica 1 nbis-gene-39907
Poaceae Zoysia macrostachya 1 Zma_g17341
Portulacaceae Portulaca oleracea 2 evm.TU.LG08.975, evm.TU.LG22.96
Posidoniaceae Posidonia oceanica 1 gene.Posoc02g23870
Rhizophoraceae Bruguiera sexangula 1 evm.TU.Scaffold_11_RagTag.189
Rhizophoraceae Carallia pectinifolia 1 nbisL1-mrna-14259
Rhizophoraceae Ceriops tagal 1 nbisL1-mrna-10047
Rhizophoraceae Ceriops zippeliana 1 nbisL1-mrna-14385
Rhizophoraceae Kandelia candel 1 add.evm.TU.utg000005l.113
Rhizophoraceae Rhizophora apiculata 1 nbisL1-mrna-16905
Rhizophoraceae Rhizophora mangle 1 nbisL1-mrna-19039
Salicaceae Populus euphratica 4 populus_peu01396, populus_peu24213, populus_peu24567 ...
populus_peu38091
Solanaceae Lycium barbarum 2 gene-LOC132630514, gene-LOC132630515
Solanaceae Solanum chilense 1 SOLCI005692300
Solanaceae Solanum pennellii 1 gene-LOC107029388
Tamaricaceae Reaumuria soongarica 1 STRG.19295_chr07_-
Tamaricaceae Tamarix chinensis 1 TC08G2289
Zosteraceae Zostera marina 1 Zosma01g04140.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.