Basic Information
Locus ID:
CQ.Regalona.r1.7BG0006670
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Ubiquitin fusion degradation protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7B | 6785521 | 6791841 | + | CQ.Regalona.r1.7BG0006670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 35,333.58 Da | 63.19 | 64.75 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 13 | 184 | 7.4E-80 | IPR004854 |
| Gene3D | G3DSA:2.40.40.50 | - | 7 | 107 | 4.5E-44 | IPR042299 |
| Gene3D | G3DSA:3.10.330.10 | - | 109 | 182 | 5.6E-34 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 227 | 318 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 191 | 215 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 285 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 253 | 277 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 232 | 246 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G21270.1 | ubiquitin fusion degradation 1. | 0 |
| RefSeq | XP_021738734.1 | ubiquitin fusion degradation protein 1 homolog [Chenopodium quinoa] | 0 |
| Q55BK0 | Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=ufd1 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803LPG0 | Ubiquitin fusion degradation protein 1 homolog OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology