HalophFGD

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Basic Information
Locus ID: CQ.Regalona.r1.7BG0005540
Species & Taxonomic ID: Chenopodium quinoa & 63459
Genome Assembly: GCA_040571445.1
Description: f-box protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr7B 5432874 5434681 + CQ.Regalona.r1.7BG0005540
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.63 55,016.00 Da 41.47 91.44 -0.06
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF03478 Protein of unknown function (DUF295) 335 374 2.1E-5 IPR005174
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021750849.1 F-box protein At2g17036-like [Chenopodium quinoa] 0
TrEMBL A0A0K9QMV3 F-box domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_161500 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Aizoaceae Mesembryanthemum crystallinum 4 gene_16244, gene_21745, gene_21763, gene_26530
Amaranthaceae Atriplex hortensis 4 Ah008814, Ah008815, Ah008816, Ah008817
Amaranthaceae Beta vulgaris 2 BVRB_4g076820, BVRB_9g224050
Amaranthaceae Salicornia bigelovii 1 Sbi_jg50516
Amaranthaceae Suaeda glauca 12 Sgl23194, Sgl23396, Sgl23397, Sgl23398, Sgl28512, Sgl28513 ...
Sgl28514, Sgl28515, Sgl28516, Sgl28518, Sgl28692, Sgl28693
Amaranthaceae Chenopodium quinoa 6 CQ.Regalona.r1.3AG0013410, CQ.Regalona.r1.3AG0025460 ...
CQ.Regalona.r1.3BG0013420, CQ.Regalona.r1.3BG0013430, CQ.Regalona.r1.3BG0026380, CQ.Regalona.r1.7BG0005540
Portulacaceae Portulaca oleracea 10 evm.TU.LG02.1509, evm.TU.LG02.1510, evm.TU.LG02.1512 ...
evm.TU.LG02.1513, evm.TU.LG02.1514, evm.TU.LG02.1515, evm.TU.LG02.1516, evm.TU.LG09.490, evm.TU.LG09.492, evm.TU.LG09.493
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.