HalophFGD

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Basic Information
Locus ID: CQ.Regalona.r1.7BG0004110
Species & Taxonomic ID: Chenopodium quinoa & 63459
Genome Assembly: GCA_040571445.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr7B 4105617 4105823 + CQ.Regalona.r1.7BG0004110
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.76 7,919.17 Da 56.63 87.35 -0.47
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 17 62 2.1E-6 IPR001810
SUPERFAMILY SSF81383 F-box domain 14 62 4.97E-10 IPR036047
Gene3D G3DSA:1.20.1280.50 - 11 59 3.3E-8 -
ProSiteProfiles PS50181 F-box domain profile. 15 62 8.941087 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_028181273.1 uncharacterized protein LOC114368119 [Glycine soja] 0
TrEMBL A0A0K9RU03 F-box domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_035320 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 8 Ah009794, Ah009803, Ah009809, Ah009813, Ah033117, Ah035364 ...
Ah035365, Ah035366
Amaranthaceae Suaeda aralocaspica 2 GOSA_00012682, GOSA_00012684
Amaranthaceae Suaeda glauca 7 Sgl21542, Sgl26859, Sgl46075, Sgl50775, Sgl66088, Sgl66212 ...
Sgl70402
Amaranthaceae Chenopodium quinoa 2 CQ.Regalona.r1.7BG0004110, CQ.Regalona.r1.7BG0004120
Poaceae Lolium multiflorum 1 gene-QYE76_019744
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.