Basic Information
Locus ID:
CQ.Regalona.r1.7BG0003680
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7B | 3757656 | 3762151 | - | CQ.Regalona.r1.7BG0003680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 89,335.37 Da | 33.76 | 88.65 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 477 | 750 | 3.07887E-98 | - |
| Pfam | PF13855 | Leucine rich repeat | 270 | 310 | 1.8E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 472 | 745 | 3.7E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 446 | 756 | 1.56E-80 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 2 | 319 | 1.53E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 549 | 764 | 2.6E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 212 | 335 | 7.7E-35 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 432 | 548 | 5.6E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 209 | 6.1E-50 | IPR032675 |
| SMART | SM00220 | serkin_6 | 471 | 751 | 1.4E-43 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 471 | 751 | 40.626076 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 596 | 608 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 477 | 509 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 338 | 358 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 328 | 358 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_021776176.1 | LOW QUALITY PROTEIN: receptor protein kinase TMK1-like [Chenopodium quinoa] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LGL7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology