Basic Information
Locus ID:
CQ.Regalona.r1.7BG0003180
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Translocase of chloroplast
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7B | 3299151 | 3303632 | + | CQ.Regalona.r1.7BG0003180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.75 | 131,393.70 Da | 42.56 | 79.87 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 553 | 798 | 9.2098E-134 | - |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 939 | 1202 | 4.6E-121 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 581 | 748 | 3.1E-29 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 574 | 715 | 5.14E-18 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 549 | 798 | 1.0E-57 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 458 | 1202 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 578 | 807 | 32.72327 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 432 | 449 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 371 | 407 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 479 | 496 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 474 | 498 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 323 | 366 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 141 | 157 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 52 | 229 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 316 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 64 | 133 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 456 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 158 | 182 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 848 | 869 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16640.1 | multimeric translocon complex in the outer envelope membrane 132. | 0 |
| RefSeq | XP_021775723.1 | translocase of chloroplast 120, chloroplastic-like [Chenopodium quinoa] | 0 |
| Q9SLF3 | Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC132 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LGH0 | AIG1-type G domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology