Basic Information
Locus ID:
CQ.Regalona.r1.7AG0022510
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7A | 62813555 | 62826224 | - | CQ.Regalona.r1.7AG0022510 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.50 | 132,850.14 Da | 44.82 | 97.97 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 223 | 362 | 2.0E-47 | IPR000719 |
| Pfam | PF13966 | zinc-binding in reverse transcriptase | 10 | 81 | 1.1E-16 | IPR026960 |
| SUPERFAMILY | SSF48371 | ARM repeat | 1082 | 1179 | 3.74E-9 | IPR016024 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 205 | 410 | 8.09E-65 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 201 | 454 | 1.4E-62 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 1080 | 1202 | 4.1E-9 | IPR011989 |
| SMART | SM00220 | serkin_6 | 210 | 401 | 3.4E-57 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 151 | 401 | 33.813488 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 291 | 303 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G50240.2 | Protein kinase family protein with ARM repeat domain. The FUSED (FU) gene belongs to Ser/Thr protein kinase family and has a key role in the hedgehog signaling pathway known to control cell proliferation and patterning in fruit flies and humans . Arabidopsis thaliana genome has a single Fu gene. Cytokinesis-defective mutants, which we named two-in-one (tio), result from mutations in Arabidopsis Fu. Phenotypic analysis of tio mutants reveals an essential role for TIO in conventional modes of cytokinesis in plant meristems and during male gametogenesis. TIO is tightly localized to the midline of the nascent phragmoplast and remains associated with the expanding phragmoplast ring. This gene was previously annotated as two gene models, AT1G50230.1 and AT1G50240.1, however the experimental evidence exists (Oh et al, Current Biology, 2005) showing that these two models are in fact single gene, named FUSED. | 0 |
| RefSeq | XP_010692392.2 | serine/threonine-protein kinase TIO isoform X2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q2QAV0 | Serine/threonine-protein kinase TIO OS=Arabidopsis thaliana OX=3702 GN=TIO PE=1 SV=1 | 0 | |
| TrEMBL | A0A803L3C5 | non-specific serine/threonine protein kinase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg34288 |
| Aizoaceae | Mesembryanthemum crystallinum | 3 | gene_16227, gene_19063, gene_20899 |
| Amaranthaceae | Atriplex hortensis | 3 | Ah018627, Ah030779, Ah031451 |
| Amaranthaceae | Beta vulgaris | 2 | BVRB_3g052030, BVRB_7g157410 |
| Amaranthaceae | Salicornia bigelovii | 10 | Sbi_jg15087, Sbi_jg27291, Sbi_jg33244, Sbi_jg41872 ... |
| Amaranthaceae | Salicornia europaea | 5 | Seu_jg26397, Seu_jg27596, Seu_jg27597, Seu_jg7954 ... |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00020065 |
| Amaranthaceae | Suaeda glauca | 6 | Sgl01343, Sgl06420, Sgl71355, Sgl71356, Sgl74949, Sgl74950 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000000165, gene:ENSEOMG00000044046 |
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.3AG0005090, CQ.Regalona.r1.3BG0005110 ... |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30098950, pistato.v30101130 |
| Apiaceae | Apium graveolens | 1 | Ag3G02051 |
| Arecaceae | Cocos nucifera | 1 | COCNU_16G004300 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103704645 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_07.1280.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri16G33559 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G50240.2 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10011182m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp1g37070.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB06g031000.2N, BniB07g005040.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G1059 |
| Casuarinaceae | Casuarina glauca | 3 | Cgl02G1016, Cgl02G1017, Cgl02G1101 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno05g16220 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0307s00005.v1.0, Dusal.0307s00009.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g33610 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-10981 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG03.1796 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00012859, Pov_00028682 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb6G30046 |
| Poaceae | Echinochloa crus-galli | 5 | AH03.395, AH03.4127, BH03.4470, BH03.471, CH07.44 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_7BG0613680 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0109850.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_016888, gene-QYE76_038619 |
| Poaceae | Oryza coarctata | 2 | Oco24G005320, Oco24G005580 |
| Poaceae | Oryza sativa | 1 | LOC_Os12g24550.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_K140200 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0305366 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr13G011840 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G206100 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG010980, gene_TRIDC2BG013430 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G095300.1, TraesCS2B02G110500.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb141360_P002 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-33303 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g5828 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG10.363, evm.TU.LG17.359 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g34870 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_1_RagTag.594 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-7574, nbisL1-mrna-7578 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-7522 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-5604 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000012l.356 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00011400 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-8446 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-702 |
| Salicaceae | Populus euphratica | 2 | populus_peu02313, populus_peu02320 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132632230 |
| Solanaceae | Solanum chilense | 1 | SOLCI001335100 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107015407 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_9911 |
| Tamaricaceae | Tamarix chinensis | 1 | TC06G1241 |
| Zosteraceae | Zostera marina | 1 | Zosma05g27660.v3.1 |