halophFGD

Basic Information

Locus ID: CQ.Regalona.r1.7AG0018440

Species & Taxonomic ID: Chenopodium quinoa & 63459

Genome Assembly: GCA_040571445.1

Description: leucine-rich repeat receptor-like serine threonine-protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr7A	53640879	53642721	+	CQ.Regalona.r1.7AG0018440

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.63	12,935.64 Da	43.39	103.31	-0.02

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00069	Protein kinase domain	9	53	1.1E-9	IPR000719
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	3	51	2.49E-16	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	1	76	7.8E-18	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	1	118	13.757342	IPR000719
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	31	43	-	IPR008271

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G54590.2	Protein kinase superfamily protein.
RefSeq	XP_021769802.1	calcium/calmodulin-regulated receptor-like kinase 1 [Chenopodium quinoa]
Swiss-Prot	Q9FIU5	Calcium/calmodulin-regulated receptor-like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRLK1 PE=1 SV=1
TrEMBL	A0A803KMV5	Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Chenopodium quinoa	3	CQ.Regalona.r1.2AG0004950, CQ.Regalona.r1.7AG0018440 ... CQ.Regalona.r1.9AG0008010
Rhizophoraceae	Rhizophora mangle	1	nbisL1-mrna-21483