Basic Information
Locus ID:
CQ.Regalona.r1.7AG0015310
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7A | 23222208 | 23228913 | - | CQ.Regalona.r1.7AG0015310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.08 | 23,931.92 Da | 31.20 | 81.61 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 60 | 188 | 1.28036E-36 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 60 | 189 | 8.0E-29 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 50 | 188 | 1.24E-36 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 41 | 189 | 1.1E-45 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 60 | 190 | 1.7E-34 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 49 | 190 | 43.508049 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 1 | 22 | 14.338738 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.2 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_021727905.1 | jacalin-related lectin 3-like [Chenopodium quinoa] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803MX75 | Jacalin-type lectin domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology