Basic Information
Locus ID:
CQ.Regalona.r1.7AG0014820
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7A | 21558499 | 21563767 | + | CQ.Regalona.r1.7AG0014820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 23,104.41 Da | 25.76 | 108.38 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 123 | 181 | 2.5E-6 | IPR001245 |
| Pfam | PF00225 | Kinesin motor domain | 61 | 140 | 4.0E-13 | IPR001752 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 124 | 184 | 5.9E-14 | IPR011009 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 60 | 129 | 1.38E-14 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 51 | 149 | 8.3E-17 | IPR036961 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 1 | 204 | 12.289504 | IPR001752 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G21380.1 | Kinesin motor family protein. | 0 |
| RefSeq | XP_021756437.1 | probable serine/threonine-protein kinase PBL19 [Chenopodium quinoa] | 0 |
| Q9SJU0 | Kinesin-like protein KIN-7M, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=KIN7M PE=2 SV=2 | 0 | |
| TrEMBL | A0A803LII3 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.4AG0016810, CQ.Regalona.r1.7AG0014820 |
| Brassicaceae | Schrenkiella parvula | 1 | SpUn0341_0010.v2.2 |