Basic Information
Locus ID:
CQ.Regalona.r1.7AG0011790
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7A | 13439296 | 13441759 | - | CQ.Regalona.r1.7AG0011790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 52,735.22 Da | 28.16 | 121.68 | 0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 279 | 299 | 0.23 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 178 | 217 | 9.7E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 385 | 483 | 3.5E-17 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 383 | 483 | 1.19E-30 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 2 | 323 | 1.09E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 90 | 167 | 1.3E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 168 | 229 | 8.4E-20 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 375 | 483 | 1.5E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 89 | 1.0E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 230 | 353 | 1.5E-29 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 204 | 228 | 50.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 24 | 48 | 98.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 121 | 145 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 73 | 96 | 400.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 276 | 300 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 97 | 120 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 180 | 203 | 130.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 255 | 483 | 18.294355 | IPR000719 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 410 | 422 | - | IPR008266 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 76 | 89 | 1.2E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 204 | 217 | 1.2E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G08850.1 | Leucine-rich repeat receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_021722388.1 | MDIS1-interacting receptor like kinase 2-like [Chenopodium quinoa] | 0 |
| Q8VZG8 | MDIS1-interacting receptor like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=MIK2 PE=1 SV=3 | 0 | |
| TrEMBL | A0A803M981 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for CQ.Regalona.r1.7AG0011790.