Basic Information
Locus ID:
CQ.Regalona.r1.7AG0011530
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7A | 13017630 | 13021137 | + | CQ.Regalona.r1.7AG0011530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 104,798.41 Da | 32.53 | 105.99 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 270 | 329 | 1.5E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 534 | 593 | 1.8E-10 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 414 | 473 | 8.3E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 74 | 3.5E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 479 | 521 | 2.6E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 712 | 889 | 8.5E-36 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 102 | 161 | 1.9E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 706 | 933 | 6.56E-54 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 47 | 362 | 2.72E-56 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 260 | 598 | 1.02E-72 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 181 | 1.0E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 289 | 367 | 2.6E-21 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 704 | 938 | 1.8E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 182 | 288 | 5.0E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 368 | 629 | 3.4E-77 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 340 | 364 | 30.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 484 | 507 | 70.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 100 | 123 | 59.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 124 | 147 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 196 | 220 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 292 | 316 | 9.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 244 | 268 | 63.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 436 | 460 | 27.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 508 | 531 | 390.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 556 | 580 | 55.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 710 | 958 | 5.1E-16 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 710 | 968 | 30.704008 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 716 | 740 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 838 | 850 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 511 | 524 | 8.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 556 | 569 | 8.9E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_021722175.1 | MDIS1-interacting receptor like kinase 1-like [Chenopodium quinoa] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M962 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology