Basic Information
Locus ID:
CQ.Regalona.r1.7AG0008010
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7A | 8206260 | 8213660 | - | CQ.Regalona.r1.7AG0008010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.22 | 75,183.45 Da | 44.33 | 84.16 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 67 | 7.3E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 157 | 199 | 1.5E-6 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 397 | 661 | 1.4E-42 | IPR001245 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 115 | 156 | 5.2E-7 | IPR025875 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 378 | 659 | 1.8E-67 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 247 | 1.46E-41 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 355 | 472 | 7.7E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 473 | 672 | 9.7E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 319 | 1.5E-53 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 395 | 665 | 35.311691 | IPR000719 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 162 | 175 | 1.5E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 141 | 154 | 1.5E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78980.1 | STRUBBELIG-receptor family 5. | 0 |
| RefSeq | XP_021720269.1 | protein STRUBBELIG-RECEPTOR FAMILY 5-like isoform X2 [Chenopodium quinoa] | 0 |
| Q6R2K1 | Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana OX=3702 GN=SRF5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M9W6 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology