Basic Information
Locus ID:
CQ.Regalona.r1.7AG0007880
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7A | 8073320 | 8080773 | - | CQ.Regalona.r1.7AG0007880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.91 | 89,767.88 Da | 52.09 | 73.81 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 56 | 203 | 5.56173E-52 | - |
| Pfam | PF00582 | Universal stress protein family | 57 | 193 | 2.2E-8 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 477 | 731 | 1.9E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 451 | 732 | 5.66E-68 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 57 | 201 | 3.77E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 546 | 753 | 4.2E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 452 | 545 | 8.4E-24 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 56 | 201 | 1.2E-9 | IPR014729 |
| SMART | SM00220 | serkin_6 | 473 | 751 | 2.7E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 473 | 751 | 36.089062 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 591 | 603 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 758 | 797 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 754 | 797 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 236 | 262 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78940.3 | - | 0 |
| RefSeq | XP_021761816.1 | U-box domain-containing protein 52-like [Chenopodium quinoa] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803KQL3 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology