Basic Information
Locus ID:
CQ.Regalona.r1.7AG0006940
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7A | 7084668 | 7096472 | + | CQ.Regalona.r1.7AG0006940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 197,245.61 Da | 44.93 | 77.88 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1491 | 1754 | 3.53057E-151 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 388 | 660 | 2.28722E-133 | - |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1530 | 1694 | 3.0E-34 | IPR002498 |
| Pfam | PF01363 | FYVE zinc finger | 33 | 100 | 2.8E-16 | IPR000306 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 402 | 650 | 2.8E-32 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1695 | 1752 | 5.2E-7 | IPR002498 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1484 | 1754 | 7.19E-81 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 454 | 626 | 3.35E-41 | IPR027409 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 32 | 105 | 6.24E-19 | IPR011011 |
| Gene3D | G3DSA:3.30.810.10 | - | 1613 | 1755 | 1.7E-41 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1449 | 1611 | 2.5E-37 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 453 | 626 | 2.9E-52 | IPR027409 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 23 | 108 | 1.5E-20 | IPR013083 |
| SMART | SM00330 | PIPK_2 | 1468 | 1755 | 3.7E-128 | IPR002498 |
| SMART | SM00064 | fyve_4 | 28 | 103 | 6.1E-18 | IPR000306 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 36 | 102 | 12.809799 | IPR017455 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1428 | 1754 | 57.824551 | IPR002498 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_021720381.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like [Chenopodium quinoa] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M9P3 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology