Basic Information
Locus ID:
CQ.Regalona.r1.6BG0019280
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Short Name:
LYK4
Description:
lysM domain receptor-like kinase 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 76915382 | 76917214 | + | CQ.Regalona.r1.6BG0019280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.35 | 61,087.29 Da | 38.02 | 96.55 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 436 | 503 | 8.5E-10 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 313 | 503 | 5.33E-37 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 436 | 552 | 1.2E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 323 | 435 | 2.0E-15 | - |
| ProSiteProfiles | PS51782 | LysM domain profile. | 118 | 165 | 9.048049 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 310 | 554 | 9.96943 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23770.1 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein. | 0 |
| RefSeq | XP_010681194.1 | lysM domain receptor-like kinase 4 [Beta vulgaris subsp. vulgaris] | 0 |
| O64825 | LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KW00 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology