Basic Information
Locus ID:
CQ.Regalona.r1.6BG0018610
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 76019041 | 76023397 | + | CQ.Regalona.r1.6BG0018610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 109,643.55 Da | 38.08 | 93.60 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 74 | 3.4E-5 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 693 | 972 | 1.1E-39 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 322 | 603 | 3.3E-45 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 685 | 975 | 1.17E-70 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 75 | 379 | 4.71E-46 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 770 | 984 | 5.3E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 293 | 628 | 3.2E-83 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 190 | 289 | 9.9E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 189 | 1.6E-33 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 669 | 769 | 1.4E-16 | - |
| SMART | SM00220 | serkin_6 | 691 | 980 | 7.8E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 691 | 981 | 35.862919 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 815 | 827 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 697 | 720 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65710.1 | HAESA-like 2. | 0 |
| RefSeq | XP_021757318.1 | LRR receptor-like serine/threonine-protein kinase HSL2 [Chenopodium quinoa] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KVT2 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology