Basic Information
Locus ID:
CQ.Regalona.r1.6BG0017540
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 74553032 | 74561852 | - | CQ.Regalona.r1.6BG0017540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.93 | 90,433.93 Da | 44.03 | 78.35 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 93 | 289 | 1.27625E-102 | - |
| Pfam | PF00183 | Hsp90 protein | 271 | 766 | 2.7E-192 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 107 | 266 | 3.1E-13 | IPR003594 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 84 | 299 | 1.44E-62 | IPR036890 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 621 | 743 | 2.48E-33 | IPR037196 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 341 | 599 | 1.06E-88 | IPR020568 |
| Gene3D | G3DSA:1.20.120.790 | - | 599 | 746 | 1.8E-51 | IPR037196 |
| Gene3D | G3DSA:3.30.565.10 | - | 70 | 314 | 2.6E-91 | IPR036890 |
| Gene3D | G3DSA:3.40.50.11260 | - | 512 | 598 | 6.0E-32 | - |
| Gene3D | G3DSA:3.30.230.80 | - | 339 | 511 | 9.8E-72 | - |
| SMART | SM00387 | HKATPase_4 | 106 | 268 | 1.9E-7 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 47 | 785 | 2.2E-239 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 104 | 113 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 105 | 127 | 1.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 201 | 223 | 1.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 84 | 104 | 1.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 256 | 273 | 1.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 275 | 293 | 1.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 154 | 171 | 1.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 172 | 189 | 1.0E-63 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 81 | 743 | 26.144375 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 753 | 795 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 302 | 323 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_021756076.1 | heat shock protein 90-5, chloroplastic-like [Chenopodium quinoa] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803L7L2 | HATPase_c domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology