Basic Information
Locus ID:
CQ.Regalona.r1.6BG0016770
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 73243051 | 73247108 | + | CQ.Regalona.r1.6BG0016770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.12 | 69,486.84 Da | 33.99 | 93.95 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 72 | 7.5E-13 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 307 | 573 | 2.2E-43 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 124 | 183 | 1.7E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 34 | 194 | 1.42E-37 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 284 | 576 | 2.93E-75 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 383 | 595 | 5.4E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 275 | 382 | 2.5E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 214 | 2.4E-58 | IPR032675 |
| SMART | SM00220 | serkin_6 | 306 | 561 | 2.9E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 306 | 561 | 34.901806 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 312 | 334 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 425 | 437 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 593 | 612 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 586 | 612 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G16000.1 | NSP-interacting kinase 1. NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP). | 0 |
| RefSeq | XP_021755463.1 | LOW QUALITY PROTEIN: protein NSP-INTERACTING KINASE 1-like [Chenopodium quinoa] | 0 |
| Q9LFS4 | Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana OX=3702 GN=NIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803L7E6 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology