Basic Information
Locus ID:
CQ.Regalona.r1.6BG0016030
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
NAC domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 71775645 | 71785650 | - | CQ.Regalona.r1.6BG0016030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.05 | 48,050.82 Da | 47.15 | 67.73 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 59 | 196 | 1.2E-21 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 43 | 215 | 1.18E-37 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 67 | 221 | 5.2E-32 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 58 | 215 | 31.911604 | IPR003441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25580.1 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. | 0 |
| RefSeq | XP_021754734.1 | SUPPRESSOR OF GAMMA RESPONSE 1-like [Chenopodium quinoa] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RQ22 | NAC domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_042010 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology