Basic Information
Locus ID:
CQ.Regalona.r1.6BG0015270
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Homocysteine s-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 70189287 | 70194103 | - | CQ.Regalona.r1.6BG0015270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 36,254.77 Da | 35.99 | 91.14 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 25 | 325 | 9.9E-71 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 21 | 328 | 1.96E-77 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 12 | 325 | 8.3E-96 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 278 | 331 | 2.6 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 6 | 266 | 7.8E-8 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 12 | 326 | 46.791824 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25900.1 | Homocysteine S-methyltransferase family protein. | 0 |
| RefSeq | XP_021753824.1 | homocysteine S-methyltransferase 1-like [Chenopodium quinoa] | 0 |
| A4ZGQ8 | Homocysteine S-methyltransferase 1 OS=Brassica oleracea var. italica OX=36774 GN=HMT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803NEE7 | Hcy-binding domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology