Basic Information
Locus ID:
CQ.Regalona.r1.6BG0012920
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 61421338 | 61431744 | + | CQ.Regalona.r1.6BG0012920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.85 | 196,463.08 Da | 54.24 | 80.52 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1477 | 1740 | 8.56897E-144 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 378 | 650 | 8.79036E-128 | - |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1516 | 1682 | 2.3E-34 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 399 | 639 | 3.1E-32 | IPR002423 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1462 | 1740 | 1.37E-79 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 444 | 616 | 1.62E-39 | IPR027409 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 443 | 616 | 2.3E-51 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1598 | 1741 | 1.7E-42 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1439 | 1597 | 2.0E-34 | IPR027484 |
| SMART | SM00330 | PIPK_2 | 1454 | 1741 | 1.5E-117 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1420 | 1740 | 58.359814 | IPR002498 |
| Coils | Coil | Coil | 480 | 500 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_021744987.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Chenopodium quinoa] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LJQ8 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology