Basic Information
Locus ID:
CQ.Regalona.r1.6BG0012730
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 60163509 | 60167470 | + | CQ.Regalona.r1.6BG0012730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.35 | 50,883.80 Da | 41.31 | 87.95 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 332 | 403 | 1.6E-14 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 4 | 315 | 1.5E-79 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 4 | 315 | 4.29E-82 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 1 | 320 | 4.2E-112 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 325 | 416 | 4.8E-8 | - |
| SMART | SM00768 | X8_cls | 331 | 416 | 9.2E-42 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 229 | 242 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01630.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_021746872.1 | glucan endo-1,3-beta-glucosidase 3-like [Chenopodium quinoa] | 0 |
| Q9ZU91 | Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803N0L7 | X8 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology