Basic Information
Locus ID:
CQ.Regalona.r1.6BG0005700
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 7860343 | 7862035 | + | CQ.Regalona.r1.6BG0005700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.07 | 31,263.48 Da | 36.09 | 91.08 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 23 | 251 | 6.26113E-89 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 18 | 251 | 1.5E-53 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 15 | 255 | 2.56E-72 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 3 | 270 | 3.0E-74 | - |
| SMART | SM00220 | serkin_6 | 17 | 254 | 4.2E-57 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 5 | 268 | 3.7E-57 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 17 | 258 | 38.336369 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 126 | 138 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 222 | 244 | 4.1E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 82 | 95 | 4.1E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 120 | 138 | 4.1E-12 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G22750.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021842795.1 | serine/threonine-protein kinase HT1-like [Spinacia oleracea] | 0 |
| Q9SSA4 | Serine/threonine-protein kinase 54 OS=Arabidopsis thaliana OX=3702 GN=CBC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LJ88 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah013551 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.6AG0005450, CQ.Regalona.r1.6BG0005700 |
| Brassicaceae | Brassica nigra | 1 | BniB08g053840.2N |