Basic Information
Locus ID:
CQ.Regalona.r1.6BG0005050
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
cysteine-rich RLK (RECEPTOR-like protein kinase) 8
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 6917154 | 6922293 | + | CQ.Regalona.r1.6BG0005050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.87 | 52,010.84 Da | 38.77 | 84.19 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00665 | Integrase core domain | 333 | 430 | 1.8E-9 | IPR001584 |
| Pfam | PF13976 | GAG-pre-integrase domain | 249 | 319 | 9.6E-7 | IPR025724 |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 332 | 458 | 5.56E-27 | IPR012337 |
| Gene3D | G3DSA:3.30.420.10 | - | 326 | 461 | 3.5E-24 | IPR036397 |
| ProSiteProfiles | PS50994 | Integrase catalytic domain profile. | 330 | 463 | 14.265409 | IPR001584 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021854413.1 | uncharacterized protein LOC110793809 [Spinacia oleracea] | 0 |
| P04146 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | 0 | |
| TrEMBL | A0A803M4B8 | Retrotrans_gag domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.