Basic Information
Locus ID:
CQ.Regalona.r1.6BG0003630
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 4915744 | 4931303 | + | CQ.Regalona.r1.6BG0003630 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.60 | 120,021.41 Da | 45.31 | 88.73 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01603 | Protein phosphatase 2A regulatory B subunit (B56 family) | 88 | 499 | 5.4E-186 | IPR002554 |
| Pfam | PF01603 | Protein phosphatase 2A regulatory B subunit (B56 family) | 608 | 1017 | 7.2E-188 | IPR002554 |
| SUPERFAMILY | SSF48371 | ARM repeat | 620 | 1004 | 8.38E-160 | IPR016024 |
| SUPERFAMILY | SSF48371 | ARM repeat | 100 | 481 | 1.04E-156 | IPR016024 |
| Gene3D | G3DSA:1.25.10.10 | - | 615 | 1018 | 1.4E-194 | IPR011989 |
| Gene3D | G3DSA:1.25.10.10 | - | 95 | 498 | 4.2E-192 | IPR011989 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 69 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 69 | - | - |
| Coils | Coil | Coil | 991 | 1011 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04113 (Meiosis - yeast)
map04113 (Meiosis - yeast)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26020.1 | Protein phosphatase 2A regulatory B subunit family protein. Encodes protein phosphatase 2A (PP2A) B'eta subunit. Targeted to nucleus and cytosol. | 0 |
| RefSeq | XP_021746748.1 | serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like [Chenopodium quinoa] | 0 |
| Q9LU89 | Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform OS=Arabidopsis thaliana OX=3702 GN=B'ETA PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M6V3 | Serine/threonine protein phosphatase 2A regulatory subunit OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology