Basic Information
Locus ID:
CQ.Regalona.r1.6BG0003600
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
f-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 4869487 | 4874840 | - | CQ.Regalona.r1.6BG0003600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.76 | 68,151.16 Da | 35.75 | 74.96 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 343 | 382 | 1.5E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 324 | 380 | 1.64E-8 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 380 | 481 | 1.3E-5 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 332 | 379 | 2.1E-5 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 333 | 380 | 10.265807 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26000.1 | Ribonuclease inhibitor. | 0 |
| RefSeq | XP_021746746.1 | F-box protein SKIP14-like [Chenopodium quinoa] | 0 |
| Q9LU91 | F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M6V1 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology