Basic Information
Locus ID:
CQ.Regalona.r1.6BG0002300
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 3217864 | 3224468 | - | CQ.Regalona.r1.6BG0002300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 69,180.55 Da | 36.00 | 87.94 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 348 | 502 | 2.1E-25 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 44 | 133 | 3.0E-17 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 157 | 245 | 6.8E-9 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 327 | 503 | 2.83E-45 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 33 | 135 | 1.5E-21 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 146 | 248 | 2.1E-15 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 320 | 418 | 3.2E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 419 | 516 | 1.6E-25 | - |
| SMART | SM00220 | serkin_6 | 347 | 599 | 1.3E-9 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 34 | 136 | 16.986717 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 347 | 620 | 22.336679 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 142 | 248 | 14.759899 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 455 | 467 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 526 | 585 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 526 | 596 | - | - |
| Coils | Coil | Coil | 316 | 336 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23280.2 | - | 0 |
| RefSeq | XP_021723130.1 | putative cysteine-rich receptor-like protein kinase 9 [Chenopodium quinoa] | 0 |
| O65479 | Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=CRK20 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803L1E3 | Cysteine-rich receptor-like protein kinase 25 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah013997 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg61233 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg22962 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.6AG0002320, CQ.Regalona.r1.6BG0002300 |