HalophFGD

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Basic Information
Locus ID: CQ.Regalona.r1.6BG0001710
Species & Taxonomic ID: Chenopodium quinoa & 63459
Genome Assembly: GCA_040571445.1
Description: Belongs to the protein kinase superfamily
Maps and Mapping Data
Chromosome Start End Strand ID
chr6B 2515498 2515716 + CQ.Regalona.r1.6BG0001710
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.70 8,122.64 Da 42.35 89.44 -0.17
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 1 70 2.5E-9 -
KEGG Pathway
KO Term:
K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G58690.1 Protein kinase superfamily protein. 0
RefSeq XP_021722950.1 probable serine/threonine-protein kinase PBL3 [Chenopodium quinoa] 0
TrEMBL A0A7C8YZ61 Protein kinase domain-containing protein (Fragment) OS=Opuntia streptacantha OX=393608 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Chenopodium quinoa 4 CQ.Regalona.r1.4AG0015160, CQ.Regalona.r1.4BG0012630 ...
CQ.Regalona.r1.6AG0001610, CQ.Regalona.r1.6BG0001710
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.