Basic Information
Locus ID:
CQ.Regalona.r1.6BG0000480
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
CSC1-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 806635 | 822592 | - | CQ.Regalona.r1.6BG0000480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.91 | 82,522.52 Da | 48.65 | 108.31 | 0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14703 | Cytosolic domain of 10TM putative phosphate transporter | 189 | 338 | 1.9E-23 | IPR027815 |
| Pfam | PF02714 | Calcium-dependent channel, 7TM region, putative phosphate | 351 | 618 | 5.4E-70 | IPR003864 |
| Pfam | PF13967 | Late exocytosis, associated with Golgi transport | 6 | 168 | 1.9E-38 | IPR032880 |
| Coils | Coil | Coil | 269 | 289 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G69450.1 | Early-responsive to dehydration stress protein (ERD4). | 0 |
| RefSeq | XP_021739987.1 | CSC1-like protein At1g69450 [Chenopodium quinoa] | 0 |
| F4I248 | CSC1-like protein At1g69450 OS=Arabidopsis thaliana OX=3702 GN=At1g69450 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9R9B9 | CSC1-like protein OS=Spinacia oleracea OX=3562 GN=SOVF_098760 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology