halophFGD

Basic Information

Locus ID: CQ.Regalona.r1.6AG0018200

Species & Taxonomic ID: Chenopodium quinoa & 63459

Genome Assembly: GCA_040571445.1

Short Name: LYK4

Description: lysM domain receptor-like kinase 4

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr6A	60599788	60600504	+	CQ.Regalona.r1.6AG0018200

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.61	26,305.60 Da	42.72	80.76	0.06

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF01476	LysM domain	69	106	0.05	IPR018392
ProSiteProfiles	PS51782	LysM domain profile.	120	167	8.956945	IPR018392

Best hit

Source	Best Hit ID	Description
TAIR	AT2G23770.1	protein kinase family protein / peptidoglycan-binding LysM domain-containing protein.
RefSeq	XP_021847829.1	lysM domain receptor-like kinase 4 isoform X1 [Spinacia oleracea]
Swiss-Prot	O64825	LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 SV=1
TrEMBL	A0A803L837	LysM domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	3	jg17500, jg22525, jg30620
Aizoaceae	Mesembryanthemum crystallinum	6	gene_16921, gene_16922, gene_16923, gene_16924, gene_5187 ... gene_5188
Amaranthaceae	Atriplex hortensis	4	Ah026610, Ah026611, Ah026613, Ah029922
Amaranthaceae	Beta vulgaris	6	BVRB_6g138000, BVRB_6g138010, BVRB_6g138020, BVRB_6g138030 ... BVRB_6g138040, BVRB_6g141580
Amaranthaceae	Salicornia bigelovii	9	Sbi_jg1022, Sbi_jg35582, Sbi_jg35584, Sbi_jg37759 ... Sbi_jg37767, Sbi_jg5905, Sbi_jg5909, Sbi_jg5910, Sbi_jg5911
Amaranthaceae	Salicornia europaea	5	Seu_jg28091, Seu_jg28097, Seu_jg28098, Seu_jg3685 ... Seu_jg3697
Amaranthaceae	Suaeda aralocaspica	4	GOSA_00008333, GOSA_00013460, GOSA_00013461, GOSA_00013614
Amaranthaceae	Suaeda glauca	11	Sgl24638, Sgl29789, Sgl34664, Sgl34665, Sgl34666, Sgl40087 ... Sgl40088, Sgl40089, Sgl72368, Sgl72383, Sgl75919
Amaranthaceae	Chenopodium album	7	gene:ENSEOMG00000000101, gene:ENSEOMG00000000651 ... gene:ENSEOMG00000002788, gene:ENSEOMG00000005777, gene:ENSEOMG00000027850, gene:ENSEOMG00000035219, gene:ENSEOMG00000042034
Amaranthaceae	Chenopodium quinoa	7	CQ.Regalona.r1.6AG0018200, CQ.Regalona.r1.6AG0018210 ... CQ.Regalona.r1.6BG0019270, CQ.Regalona.r1.6BG0019280, CQ.Regalona.r1.6BG0019290, CQ.Regalona.r1.7AG0013920, CQ.Regalona.r1.7BG0016230
Anacardiaceae	Pistacia vera	5	pistato.v30047690, pistato.v30153180, pistato.v30207320 ... pistato.v30291410, pistato.v30291450
Apiaceae	Apium graveolens	4	Ag3G00591, Ag4G01027, Ag4G01028, Ag5G00787
Arecaceae	Cocos nucifera	2	COCNU_01G007550, COCNU_05G000290
Arecaceae	Phoenix dactylifera	3	gene-LOC103701426, gene-LOC103723953, gene-LOC113462358
Asparagaceae	Asparagus officinalis	4	AsparagusV1_01.185.V1.1, AsparagusV1_03.2251.V1.1 ... AsparagusV1_07.3896.V1.1, AsparagusV1_08.1513.V1.1
Asteraceae	Flaveria trinervia	4	Ftri10G13810, Ftri17G17475, Ftri18G25991, Ftri8G28749
Brassicaceae	Arabidopsis thaliana	2	AT2G23770.1, AT2G33580.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10000091m.g.v1.0, Thhalv10016366m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp4g02700.v2.2, Sp4g15920.v2.2
Brassicaceae	Brassica nigra	2	BniB01g010560.2N, BniB01g019900.2N
Casuarinaceae	Casuarina glauca	1	Cgl05G0727
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno13g01750, gene.Cymno13g01760
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate06g21590
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-7060, nbisL1-mrna-7988
Nitrariaceae	Nitraria sibirica	3	evm.TU.LG02.2263, evm.TU.LG02.2264, evm.TU.LG06.10
Plantaginaceae	Plantago ovata	3	Pov_00026788, Pov_00029365, Pov_00037519
Plumbaginaceae	Limonium bicolor	1	Lb5G29150
Poaceae	Echinochloa crus-galli	5	AH04.1632, AH07.674, BH07.802, CH01.1549, CH04.1877
Poaceae	Eleusine coracana subsp. coracana	4	gene-QOZ80_2AG0104730, gene-QOZ80_2BG0158130 ... gene-QOZ80_9AG0685430, gene-QOZ80_9BG0711550
Poaceae	Hordeum vulgare	2	HORVU.MOREX.r3.6HG0574360.1.CDS1 ... HORVU.MOREX.r3.6HG0574410.1.CDS1
Poaceae	Lolium multiflorum	2	gene-QYE76_021257, gene-QYE76_066580
Poaceae	Oryza coarctata	5	Oco03G005170, Oco04G004760, Oco11G013180, Oco12G013370 ... Oco22G008420
Poaceae	Oryza sativa	4	LOC_Os02g09960.1, LOC_Os06g41960.1, LOC_Os06g41980.1 ... LOC_Os11g35330.1
Poaceae	Paspalum vaginatum	2	gene-BS78_04G070100, gene-BS78_05G169600
Poaceae	Puccinellia tenuiflora	1	Pt_Chr0202212
Poaceae	Sporobolus alterniflorus	3	Chr06G033340, Chr15G024720, Chr31G006770
Poaceae	Thinopyrum elongatum	1	Tel6E01G340400
Poaceae	Triticum dicoccoides	4	gene_TRIDC2BG069690, gene_TRIDC6AG024210 ... gene_TRIDC6BG029480, gene_TRIDC6BG029530
Poaceae	Triticum aestivum	17	TraesCS2A02G456900.1, TraesCS2B02G479400.1.cds1 ... TraesCS2D02G457300.1.cds1, TraesCS2D02G457400.1.cds1, TraesCS2D02G457600.1.cds1, TraesCS4A02G427200.1, TraesCS4A02G428200.1.cds1, TraesCS6A02G168800.1, TraesCS6A02G168900.1.cds1, TraesCS6B02G196800.1.cds1, TraesCS6B02G197000.1.cds1, TraesCS6D02G157800.1, TraesCS6D02G157900.1.cds1, TraesCS6D02G158300.1.cds1, TraesCS6D02G158400.1.cds1, TraesCS7A02G061600.1.cds1, TraesCS7D02G056600.1.cds1
Poaceae	Zea mays	3	Zm00001eb201900_P001, Zm00001eb206220_P001 ... Zm00001eb236640_P001
Poaceae	Zoysia japonica	4	nbis-gene-33502, nbis-gene-40976, nbis-gene-44101 ... nbis-gene-44238
Poaceae	Zoysia macrostachya	4	Zma_g12365, Zma_g15111, Zma_g18072, Zma_g33091
Portulacaceae	Portulaca oleracea	11	evm.TU.LG01.154, evm.TU.LG01.155, evm.TU.LG03.1406 ... evm.TU.LG03.1407, evm.TU.LG03.1408, evm.TU.LG04.597, evm.TU.LG04.598, evm.TU.LG04.599, evm.TU.LG12.52, evm.TU.LG12.53, evm.TU.LG12.54
Posidoniaceae	Posidonia oceanica	2	gene.Posoc06g18910, gene.Posoc10g03970
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_3_RagTag.285, evm.TU.Scaffold_6_RagTag.2220 ... evm.TU.Scaffold_7_RagTag.538, evm.TU.Scaffold_8_RagTag.1361
Rhizophoraceae	Carallia pectinifolia	5	nbisL1-mrna-17165, nbisL1-mrna-19090, nbisL1-mrna-3326 ... nbisL1-mrna-338, nbisL1-mrna-536
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-17782, nbisL1-mrna-5650, nbisL1-mrna-9167
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-11829, nbisL1-mrna-15290, nbisL1-mrna-15292 ... nbisL1-mrna-21862
Rhizophoraceae	Kandelia candel	3	add.evm.TU.utg000002l.203, add.evm.TU.utg000018l.85 ... evm.TU.utg000011l.1195
Rhizophoraceae	Kandelia obovata	2	Maker00003474, Maker00008221
Rhizophoraceae	Rhizophora apiculata	6	nbisL1-mrna-20531, nbisL1-mrna-20532, nbisL1-mrna-20533 ... nbisL1-mrna-23025, nbisL1-mrna-23026, nbisL1-mrna-6474
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-18734, nbisL1-mrna-18735, nbisL1-mrna-3135 ... nbisL1-mrna-3137
Salicaceae	Populus euphratica	8	populus_peu14291, populus_peu14292, populus_peu14300 ... populus_peu23511, populus_peu31923, populus_peu33191, populus_peu37402, populus_peu38088
Solanaceae	Lycium barbarum	3	gene-LOC132604118, gene-LOC132622111, gene-LOC132623371
Solanaceae	Solanum chilense	2	SOLCI000495700, SOLCI000495800
Solanaceae	Solanum pennellii	2	gene-LOC107008847, gene-LOC107010761
Tamaricaceae	Reaumuria soongarica	6	gene_10889, gene_1635, gene_1636, gene_3435, gene_3436 ... gene_3437
Tamaricaceae	Tamarix chinensis	3	TC04G2093, TC08G2080, TC11G0539