Basic Information
Locus ID:
CQ.Regalona.r1.6AG0017470
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 59580046 | 59583197 | + | CQ.Regalona.r1.6AG0017470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.30 | 87,862.85 Da | 39.10 | 92.14 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 669 | 756 | 3.5E-10 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 74 | 7.3E-6 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 661 | 756 | 2.46E-19 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 59 | 314 | 2.38E-42 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 324 | 599 | 1.12E-39 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 186 | 5.2E-32 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 657 | 777 | 8.3E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 265 | 319 | 3.4E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 320 | 605 | 1.1E-57 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 187 | 264 | 3.0E-18 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 667 | 790 | 11.411098 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 673 | 696 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65710.1 | HAESA-like 2. | 0 |
| RefSeq | XP_021757318.1 | LRR receptor-like serine/threonine-protein kinase HSL2 [Chenopodium quinoa] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RTK5 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_031210 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology