Basic Information
Locus ID:
CQ.Regalona.r1.6AG0012770
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 48032624 | 48040424 | - | CQ.Regalona.r1.6AG0012770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.36 | 54,815.51 Da | 39.42 | 93.10 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 370 | 441 | 4.1E-16 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 33 | 353 | 7.5E-82 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 33 | 353 | 2.56E-83 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 32 | 358 | 2.3E-114 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 363 | 455 | 5.0E-9 | - |
| SMART | SM00768 | X8_cls | 369 | 454 | 9.6E-46 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 267 | 280 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01630.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_021727203.1 | glucan endo-1,3-beta-glucosidase 3-like [Chenopodium quinoa] | 0 |
| Q9ZU91 | Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803LJL3 | X8 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology