halophFGD

Basic Information

Locus ID: CQ.Regalona.r1.6AG0012760

Species & Taxonomic ID: Chenopodium quinoa & 63459

Genome Assembly: GCA_040571445.1

Description: Belongs to the glycosyl hydrolase 17 family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr6A	48026207	48028759	-	CQ.Regalona.r1.6AG0012760

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.26	11,867.38 Da	78.06	71.39	0.01

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID

KEGG Pathway

KO Term:

K19891 (glucan endo-1,3-beta-glucosidase 1/2/3 [EC:3.2.1.39])

Pathway:

ko00500 (Starch and sucrose metabolism) map00500 (Starch and sucrose metabolism)

Reaction:

R00308 (1,3-beta-D-Glucan + H2O <=> D-Glucose + 1,3-beta-D-Glucan)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_021727203.1	glucan endo-1,3-beta-glucosidase 3-like [Chenopodium quinoa]	0
TrEMBL	A0A803LJL3	X8 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	8	jg1626, jg20017, jg20432, jg21868, jg29047, jg29822, jg5146 ... jg7356
Aizoaceae	Mesembryanthemum crystallinum	4	gene_10534, gene_17422, gene_18735, gene_87
Amaranthaceae	Atriplex hortensis	4	Ah004855, Ah015602, Ah017509, Ah033303
Amaranthaceae	Beta vulgaris	4	BVRB_2g039230, BVRB_4g071160, BVRB_6g144440, BVRB_8g185980
Amaranthaceae	Salicornia bigelovii	8	Sbi_jg18064, Sbi_jg19496, Sbi_jg40164, Sbi_jg41965 ... Sbi_jg44051, Sbi_jg48172, Sbi_jg50118, Sbi_jg62691
Amaranthaceae	Salicornia europaea	4	Seu_jg1294, Seu_jg1743, Seu_jg17900, Seu_jg27516
Amaranthaceae	Suaeda aralocaspica	4	GOSA_00011340, GOSA_00014337, GOSA_00015231, GOSA_00025173
Amaranthaceae	Suaeda glauca	8	Sgl23798, Sgl28963, Sgl42758, Sgl46333, Sgl47523, Sgl51048 ... Sgl64256, Sgl68706
Amaranthaceae	Chenopodium album	11	gene:ENSEOMG00000000862, gene:ENSEOMG00000003410 ... gene:ENSEOMG00000009154, gene:ENSEOMG00000011694, gene:ENSEOMG00000015750, gene:ENSEOMG00000017245, gene:ENSEOMG00000027155, gene:ENSEOMG00000028401, gene:ENSEOMG00000042344, gene:ENSEOMG00000045138, gene:ENSEOMG00000051434
Amaranthaceae	Chenopodium quinoa	9	CQ.Regalona.r1.2AG0007810, CQ.Regalona.r1.2BG0009180 ... CQ.Regalona.r1.4AG0000270, CQ.Regalona.r1.4BG0000310, CQ.Regalona.r1.6AG0012760, CQ.Regalona.r1.6AG0012770, CQ.Regalona.r1.6BG0012730, CQ.Regalona.r1.8AG0001580, CQ.Regalona.r1.8BG0001510
Anacardiaceae	Pistacia vera	6	pistato.v30050370, pistato.v30086050, pistato.v30190240 ... pistato.v30196800, pistato.v30218030, pistato.v30282550
Apiaceae	Apium graveolens	4	Ag1G01666, Ag7G00593, Ag7G01762, Ag9G01380
Arecaceae	Cocos nucifera	6	COCNU_02G005250, COCNU_06G011950, COCNU_06G014140 ... scaffold001699G000020, scaffold003371G000020, scaffold015002G000020
Arecaceae	Phoenix dactylifera	6	gene-LOC103695690, gene-LOC103697069, gene-LOC103706713 ... gene-LOC103707195, gene-LOC103716286, gene-LOC103719148
Asparagaceae	Asparagus officinalis	2	AsparagusV1_03.1553.V1.1, AsparagusV1_07.3874.V1.1
Asteraceae	Flaveria trinervia	8	Ftri11G17022, Ftri12G08386, Ftri15G13201, Ftri16G05516 ... Ftri17G24019, Ftri2G00626, Ftri5G27873, Ftri9G20072
Brassicaceae	Arabidopsis thaliana	4	AT1G11820.2, AT1G66250.1, AT2G01630.1, AT3G13560.1
Brassicaceae	Eutrema salsugineum	4	Thhalv10004013m.g.v1.0, Thhalv10006713m.g.v1.0 ... Thhalv10018427m.g.v1.0, Thhalv10020572m.g.v1.0
Brassicaceae	Schrenkiella parvula	4	Sp1g10440.v2.2, Sp2g13080.v2.2, Sp3g11770.v2.2 ... Sp5g21310.v2.2
Brassicaceae	Brassica nigra	5	BniB01g051640.2N, BniB02g006570.2N, BniB03g004690.2N ... BniB04g009530.2N, BniB05g062210.2N
Casuarinaceae	Casuarina equisetifolia	4	Ceq04G1617, Ceq05G2344, Ceq08G0631, Ceq09G0833
Casuarinaceae	Casuarina glauca	4	Cgl04G1795, Cgl05G2501, Cgl08G0604, Cgl09G0905
Cymodoceaceae	Cymodocea nodosa	4	gene.Cymno01g02400, gene.Cymno09g06340, gene.Cymno11g08330 ... gene.Cymno13g01620
Hydrocharitaceae	Thalassia testudinum	3	gene.Thate02g37310, gene.Thate05g22130, gene.Thate05g23890
Malvaceae	Hibiscus hamabo Siebold & Zucc.	4	nbisL1-mrna-2637, nbisL1-mrna-3538, nbisL1-mrna-7704 ... nbisL1-mrna-9890
Nitrariaceae	Nitraria sibirica	4	evm.TU.LG02.614, evm.TU.LG03.1294, evm.TU.LG09.404 ... evm.TU.LG12.1142
Plantaginaceae	Plantago ovata	4	Pov_00005938, Pov_00017476, Pov_00026349, Pov_00026870
Plumbaginaceae	Limonium bicolor	5	Lb1G04591, Lb2G13159, Lb4G22959, Lb6G31063, Lb7G33226
Poaceae	Echinochloa crus-galli	7	AH01.4495, AH02.3825, AH03.3126, AH03.3478, BH07.4146 ... CH01.5113, Contig192.133
Poaceae	Eleusine coracana subsp. coracana	6	gene-QOZ80_3AG0239170, gene-QOZ80_3BG0288820 ... gene-QOZ80_7AG0568740, gene-QOZ80_7AG0574230, gene-QOZ80_7BG0600130, gene-QOZ80_7BG0605510
Poaceae	Hordeum vulgare	4	HORVU.MOREX.r3.2HG0131600.1, HORVU.MOREX.r3.2HG0141980.1 ... HORVU.MOREX.r3.4HG0395910.1, HORVU.MOREX.r3.5HG0466440.1
Poaceae	Lolium multiflorum	6	gene-QYE76_017013, gene-QYE76_040115, gene-QYE76_040612 ... gene-QYE76_041064, gene-QYE76_041144, gene-QYE76_069720
Poaceae	Oryza coarctata	6	Oco05G006760, Oco06G006950, Oco13G008330, Oco13G010840 ... Oco14G008810, Oco14G011580
Poaceae	Oryza sativa	4	LOC_Os03g12140.1, LOC_Os07g32600.1, LOC_Os07g38930.5 ... LOC_Os08g14390.1
Poaceae	Paspalum vaginatum	3	gene-BS78_01G434800, gene-BS78_02G289900 ... gene-BS78_02G326000
Poaceae	Puccinellia tenuiflora	4	Pt_Chr0101797, Pt_Chr0104181, Pt_Chr0304607, Pt_Chr0405476
Poaceae	Sporobolus alterniflorus	6	Chr01G027610, Chr12G011770, Chr19G003670, Chr24G008300 ... Chr27G013600, Chr28G007620
Poaceae	Thinopyrum elongatum	4	Tel2E01G371100, Tel2E01G418500, Tel4E01G414300 ... Tel5E01G268700
Poaceae	Triticum dicoccoides	8	gene_TRIDC2AG023810, gene_TRIDC2AG030070 ... gene_TRIDC2BG029320, gene_TRIDC2BG033800, gene_TRIDC4AG008610, gene_TRIDC4BG042450, gene_TRIDC5AG025880, gene_TRIDC5BG026990
Poaceae	Triticum aestivum	12	TraesCS2A02G186900.1, TraesCS2A02G224900.1 ... TraesCS2B02G220300.1, TraesCS2B02G274900.1, TraesCS2D02G201000.1, TraesCS2D02G230900.1, TraesCS4A02G064900.2, TraesCS4B02G242300.1, TraesCS4D02G241900.1, TraesCS5A02G155600.1, TraesCS5B02G153900.1, TraesCS5D02G160700.1
Poaceae	Zea mays	5	Zm00001eb008930_P001, Zm00001eb107530_P001 ... Zm00001eb322450_P005, Zm00001eb325370_P001, Zm00001eb399910_P002
Poaceae	Zoysia japonica	1	nbis-gene-608
Poaceae	Zoysia macrostachya	4	Zma_g1761, Zma_g5417, Zma_g6503, Zma_g6709
Portulacaceae	Portulaca oleracea	14	evm.TU.LG01.1894, evm.TU.LG05.1267, evm.TU.LG06.1175 ... evm.TU.LG11.522, evm.TU.LG13.870, evm.TU.LG14.1081, evm.TU.LG18.1112, evm.TU.LG18.1113, evm.TU.LG18.885, evm.TU.LG20.758, evm.TU.LG20.760, evm.TU.LG20.982, evm.TU.LG21.538, evm.TU.LG25.96
Posidoniaceae	Posidonia oceanica	4	gene.Posoc03g04640, gene.Posoc04g09170, gene.Posoc08g00370 ... gene.Posoc10g03760
Rhizophoraceae	Bruguiera sexangula	5	evm.TU.Scaffold_12_RagTag.1008, evm.TU.Scaffold_3_RagTag.762 ... evm.TU.Scaffold_15_RagTag.223, evm.TU.Scaffold_17_RagTag.777, evm.TU.Scaffold_7_RagTag.1748
Rhizophoraceae	Carallia pectinifolia	5	nbisL1-mrna-1196, nbisL1-mrna-19782, nbisL1-mrna-23489 ... nbisL1-mrna-23959, nbisL1-mrna-26452
Rhizophoraceae	Ceriops tagal	6	nbisL1-mrna-12316, nbisL1-mrna-17333, nbisL1-mrna-17889 ... nbisL1-mrna-20571, nbisL1-mrna-6354, nbisL1-mrna-9106
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-17548, nbisL1-mrna-20040, nbisL1-mrna-21710 ... nbisL1-mrna-6440
Rhizophoraceae	Kandelia candel	5	evm.TU.utg000001l.141, evm.TU.utg000002l.21 ... evm.TU.utg000013l.428, evm.TU.utg000019l.749, evm.TU.utg000027l.28
Rhizophoraceae	Kandelia obovata	5	Maker00004541, Maker00004658, Maker00012127, Maker00012716 ... Maker00017440
Rhizophoraceae	Rhizophora apiculata	5	nbisL1-mrna-10712, nbisL1-mrna-10823, nbisL1-mrna-11584 ... nbisL1-mrna-5214, nbisL1-mrna-5818
Rhizophoraceae	Rhizophora mangle	5	nbisL1-mrna-12428, nbisL1-mrna-13200, nbisL1-mrna-14262 ... nbisL1-mrna-23282, nbisL1-mrna-2721
Salicaceae	Populus euphratica	7	populus_peu04446, populus_peu09668, populus_peu10360 ... populus_peu18472, populus_peu21192, populus_peu24858, populus_peu35264
Solanaceae	Lycium barbarum	5	gene-LOC132614704, gene-LOC132615184, gene-LOC132625120 ... gene-LOC132626062, gene-LOC132640814
Solanaceae	Solanum chilense	4	SOLCI002550200, SOLCI003965200, SOLCI004136200 ... SOLCI005204300
Solanaceae	Solanum pennellii	4	gene-LOC107008136, gene-LOC107011211, gene-LOC107018050 ... gene-LOC107029045
Tamaricaceae	Reaumuria soongarica	6	STRG.27114_chr04_+, STRG.27115_chr04_+, STRG.28767_chr04_- ... STRG.7338_chr04_-, gene_10205, gene_2441
Tamaricaceae	Tamarix chinensis	5	TC01G2211, TC02G2154, TC04G0106, TC06G2579, TC08G0093
Zosteraceae	Zostera marina	4	Zosma03g23050.v3.1, Zosma03g35630.v3.1, Zosma06g10410.v3.1 ... Zosma06g23210.v3.1