Basic Information
Locus ID:
CQ.Regalona.r1.6AG0012330
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 46500676 | 46511199 | + | CQ.Regalona.r1.6AG0012330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 192,226.91 Da | 53.56 | 78.66 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1439 | 1702 | 3.06662E-144 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 385 | 657 | 3.51832E-128 | - |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1478 | 1644 | 2.2E-34 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 406 | 647 | 2.9E-32 | IPR002423 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 451 | 623 | 3.66E-39 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1429 | 1702 | 1.7E-79 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1401 | 1559 | 1.7E-34 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 450 | 623 | 4.3E-51 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1560 | 1703 | 1.6E-42 | - |
| SMART | SM00330 | PIPK_2 | 1408 | 1703 | 1.9E-117 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1382 | 1702 | 58.562843 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1155 | 1202 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1165 | 1202 | - | - |
| Coils | Coil | Coil | 487 | 507 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_021727305.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Chenopodium quinoa] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LJQ8 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology