Basic Information
Locus ID:
CQ.Regalona.r1.6AG0009990
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 25020565 | 25025340 | + | CQ.Regalona.r1.6AG0009990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 51,624.23 Da | 42.72 | 87.84 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18316 | BTB_POZ_KCTD-like | 19 | 95 | 1.69472E-17 | - |
| Pfam | PF02214 | BTB/POZ domain | 19 | 103 | 3.6E-11 | IPR003131 |
| SUPERFAMILY | SSF54695 | POZ domain | 16 | 101 | 4.97E-14 | IPR011333 |
| SUPERFAMILY | SSF50969 | YVTN repeat-like/Quinoprotein amine dehydrogenase | 189 | 378 | 1.45E-7 | IPR011044 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 3 | 106 | 3.5E-18 | IPR011333 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09030.1 | BTB/POZ domain-containing protein. | 0 |
| RefSeq | XP_021720463.1 | BTB/POZ domain-containing protein At3g09030-like [Chenopodium quinoa] | 0 |
| Q9S7R7 | Protein ENDOPLASMIC RETICULUM-ARRESTED PEN3 OS=Arabidopsis thaliana OX=3702 GN=EAP3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MMG8 | BTB_2 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology